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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs4932436 chr15:89396676 C/A PICK1 chr22:38452318-38471708:+ -0.44 -6.08 2.41E-9 Box Plot
THCA rs4932436 chr15:89396676 C/A RBX1 chr22:41347351-41369313:+ -0.34 -6.1 2.24E-9 Box Plot
THCA rs4932438 chr15:89397057 T/C ALG12 chr22:50293877-50312106:- -0.43 -6.64 8.73E-11 Box Plot
THCA rs4932438 chr15:89397057 T/C NHP2L1 chr22:42069934-42086508:- -0.49 -6.76 4.11E-11 Box Plot
THCA rs4932438 chr15:89397057 T/C PICK1 chr22:38452318-38471708:+ -0.43 -6.03 3.36E-9 Box Plot
THCA rs4932438 chr15:89397057 T/C RBX1 chr22:41347351-41369313:+ -0.33 -5.96 4.89E-9 Box Plot
THCA rs4933429 chr10:88908940 A/T FAM35B chr10:46897641-46939143:+ 0.37 7.22 2.05E-12 Box Plot
THCA rs4933431 chr10:88925200 A/G FAM35B chr10:46897641-46939143:+ 0.38 7.35 8.72E-13 Box Plot
THCA rs4933432 chr10:88925529 T/A FAM35B chr10:46897641-46939143:+ 0.66 11.03 2.41E-25 Box Plot
THCA rs4934310 chr10:88929623 G/A FAM35B chr10:46897641-46939143:+ 0.66 10.96 4.39E-25 Box Plot
THCA rs4934311 chr10:88929652 C/A FAM35B chr10:46897641-46939143:+ 0.66 10.96 4.39E-25 Box Plot
THCA rs4935069 chr10:51820906 A/G FAM21B chr10:47894023-47949412:+ 0.47 7.47 3.94E-13 Box Plot
THCA rs4935415 chr10:51821780 C/T FAM21B chr10:47894023-47949412:+ 0.47 7.43 5.2E-13 Box Plot
THCA rs4944164 chr11:77275849 G/A INTS4L1 chr7:64601603-64694600:+ 0.36 6.2 1.2E-9 Box Plot
THCA rs4945178 chr11:77248911 T/C INTS4L1 chr7:64601603-64694600:+ 0.36 6.08 2.45E-9 Box Plot